flowstab.scripts.run_laplacians_transmats
=========================================

.. py:module:: flowstab.scripts.run_laplacians_transmats

.. autoapi-nested-parse::

   Helper script to automatize and parallelize the computation of Laplacians,
   inter-event transition matrices and transition matrices for a temporal network.

   Computes the inter event transition matrices. This is done by first splitting
   the temporal network in a given number of slices (controlled by `num_slices` or `slice_length`) and spreading the computation
   for each slice over `ncpu` parallel jobs.
   The results for each slice and each value of the resolution (`tau_w_list`) are saved in separate files
   named {savedir}/{net_name}_tau_w{tau_w}_int{slice_number}__inter_trans_mat.{ext}.



Attributes
----------

.. autoapisummary::

   flowstab.scripts.run_laplacians_transmats.ap
   flowstab.scripts.run_laplacians_transmats.args
   flowstab.scripts.run_laplacians_transmats.attributes_list_to_save
   flowstab.scripts.run_laplacians_transmats.batch
   flowstab.scripts.run_laplacians_transmats.batch
   flowstab.scripts.run_laplacians_transmats.batch_num
   flowstab.scripts.run_laplacians_transmats.batch_size
   flowstab.scripts.run_laplacians_transmats.compress_inter_T
   flowstab.scripts.run_laplacians_transmats.compress_slice_trans
   flowstab.scripts.run_laplacians_transmats.compute_expm_transmat
   flowstab.scripts.run_laplacians_transmats.compute_intermediate
   flowstab.scripts.run_laplacians_transmats.compute_lin_transmat
   flowstab.scripts.run_laplacians_transmats.datadir
   flowstab.scripts.run_laplacians_transmats.force_csr
   flowstab.scripts.run_laplacians_transmats.full_batch
   flowstab.scripts.run_laplacians_transmats.inargs
   flowstab.scripts.run_laplacians_transmats.intervals_to_skip
   flowstab.scripts.run_laplacians_transmats.ncpu
   flowstab.scripts.run_laplacians_transmats.net
   flowstab.scripts.run_laplacians_transmats.net_filename
   flowstab.scripts.run_laplacians_transmats.net_name
   flowstab.scripts.run_laplacians_transmats.num_slices
   flowstab.scripts.run_laplacians_transmats.optional
   flowstab.scripts.run_laplacians_transmats.required
   flowstab.scripts.run_laplacians_transmats.reverse_time_list
   flowstab.scripts.run_laplacians_transmats.save_delta_inter_T
   flowstab.scripts.run_laplacians_transmats.save_flow_int
   flowstab.scripts.run_laplacians_transmats.save_inter_T
   flowstab.scripts.run_laplacians_transmats.save_slice_trans
   flowstab.scripts.run_laplacians_transmats.save_static_adjacencies
   flowstab.scripts.run_laplacians_transmats.savedir
   flowstab.scripts.run_laplacians_transmats.slice_length
   flowstab.scripts.run_laplacians_transmats.t0
   flowstab.scripts.run_laplacians_transmats.t_s
   flowstab.scripts.run_laplacians_transmats.t_starts
   flowstab.scripts.run_laplacians_transmats.t_stops
   flowstab.scripts.run_laplacians_transmats.tau_ws
   flowstab.scripts.run_laplacians_transmats.tend
   flowstab.scripts.run_laplacians_transmats.time_slices
   flowstab.scripts.run_laplacians_transmats.time_slices_from_net_file
   flowstab.scripts.run_laplacians_transmats.tol
   flowstab.scripts.run_laplacians_transmats.total_num_batches
   flowstab.scripts.run_laplacians_transmats.use_dense_expm
   flowstab.scripts.run_laplacians_transmats.use_sparse_stoch
   flowstab.scripts.run_laplacians_transmats.verbose


Functions
---------

.. autoapisummary::

   flowstab.scripts.run_laplacians_transmats.main
   flowstab.scripts.run_laplacians_transmats.worker


Module Contents
---------------

.. py:function:: main()

.. py:function:: worker(net_start_stop)

.. py:data:: ap

.. py:data:: args

.. py:data:: attributes_list_to_save
   :value: ['_t_start_laplacians', '_k_start_laplacians', '_t_stop_laplacians', '_k_stop_laplacians',...


.. py:data:: batch

.. py:data:: batch

.. py:data:: batch_num

.. py:data:: batch_size

.. py:data:: compress_inter_T

.. py:data:: compress_slice_trans

.. py:data:: compute_expm_transmat

.. py:data:: compute_intermediate
   :value: True


.. py:data:: compute_lin_transmat

.. py:data:: datadir

.. py:data:: force_csr

.. py:data:: full_batch

.. py:data:: inargs

.. py:data:: intervals_to_skip

.. py:data:: ncpu

.. py:data:: net

.. py:data:: net_filename

.. py:data:: net_name

.. py:data:: num_slices

.. py:data:: optional

.. py:data:: required

.. py:data:: reverse_time_list
   :value: [False, True]


.. py:data:: save_delta_inter_T

.. py:data:: save_flow_int

.. py:data:: save_inter_T

.. py:data:: save_slice_trans

.. py:data:: save_static_adjacencies

.. py:data:: savedir

.. py:data:: slice_length

.. py:data:: t0

.. py:data:: t_s

.. py:data:: t_starts

.. py:data:: t_stops

.. py:data:: tau_ws

.. py:data:: tend

.. py:data:: time_slices

.. py:data:: time_slices_from_net_file

.. py:data:: tol

.. py:data:: total_num_batches

.. py:data:: use_dense_expm

.. py:data:: use_sparse_stoch

.. py:data:: verbose